Create a CNA baseline
Author: Giorgia Mori
For baseline creation you have to select five or more normal male samples (10-12 samples are recommended).
From Ion Reporter:
In the Workflows tab, in the Presets screen, click Create Preset, then select Copy Number Baseline from the dropdown list;
Click AmpliSeq, then select your Target Regions file, then click Next;
Select at least 5 normal male samples, then click Next;
Enter a name for your baseline, then click Create Baseline.
- In Workflows -> Presets -> Copy Number Baselines check the status of your baseline, when it is successful, you can start to create your workflow.